List of tools for dealing with the wonderful PDF format.
Clojure-esqe Python library wrappers
An essential list of resources for digital nomads
My spacemacs configuration.
Artificial Intelligence : A Modern Approach - Ocaml Implementation (Unofficial)
Python implementation of algorithms from Russell And Norvig's "Artificial Intelligence - A Modern Approach"
push eventseqeralabs/gatk4-germline-snps-indels
commit sha 275f07ee37e997db398506d394ea516694ef9358
initial draft ports for WDL tasks
commit sha 437c19b6225463432ec30ef4a9a13b95c48e116f
port more processes from WDL
commit sha db701feeec52d2f5f5ec0cf0e581ad9fa51a6382
completed the draft ports of all processes from WDL pipeline
push time in 3 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha db701feeec52d2f5f5ec0cf0e581ad9fa51a6382
completed the draft ports of all processes from WDL pipeline
push time in 3 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 437c19b6225463432ec30ef4a9a13b95c48e116f
port more processes from WDL
push time in 3 days
PR opened abhi18av/gatk4-germline-snps-indels
This PR is a stand-in for https://github.com/seqeralabs/gatk4-germline-snps-indels/pull/3
pr created time in 3 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 275f07ee37e997db398506d394ea516694ef9358
initial draft ports for WDL tasks
push time in 3 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha 29ff62cd46424e9166d407efa16d070fb70d130b
minor tweak
push time in 3 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 29ff62cd46424e9166d407efa16d070fb70d130b
minor tweak
push time in 3 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha 6f7ba4eded71044f07abb961b88c4082cbb79520
add test.yaml for all modules
commit sha 476e00854ac71993c88c10ba1351f7ec1e13ad56
interim commit
commit sha 5068524cef696eba144b9f25d6664ad46ebdef77
interim commit
commit sha 145cc696be3174c87287bd393b9ef2be8fc29433
got haplotype_caller.nf working with mtb genomes
push time in 4 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 145cc696be3174c87287bd393b9ef2be8fc29433
got haplotype_caller.nf working with mtb genomes
push time in 4 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 5068524cef696eba144b9f25d6664ad46ebdef77
interim commit
push time in 4 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 476e00854ac71993c88c10ba1351f7ec1e13ad56
interim commit
push time in 4 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 6f7ba4eded71044f07abb961b88c4082cbb79520
add test.yaml for all modules
push time in 4 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha 9436b525133906fb7fd5ba1fccd96e1377ffeab6
download the scatter intervals list and tweak haplotype_caller.nf
commit sha 388816a9741ef3accc06fcaf0d3b6074d090fe0f
update gitignore
commit sha e48e30f2632d6a024594c5b7a082ce22da153596
interim commit
commit sha 3f9bd36daecf59d3684edc36f140c474e59a4b7c
done with merging the gvcfs
commit sha 480dcefb84772c5a79943465767e47bd6404d2dc
interim commit
commit sha 091f4ade805da6fa77186233857b5ad3855d7162
interim commit
push time in 4 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 091f4ade805da6fa77186233857b5ad3855d7162
interim commit
push time in 4 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 480dcefb84772c5a79943465767e47bd6404d2dc
interim commit
push time in 4 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 3f9bd36daecf59d3684edc36f140c474e59a4b7c
done with merging the gvcfs
push time in 4 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha e48e30f2632d6a024594c5b7a082ce22da153596
interim commit
push time in 4 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 388816a9741ef3accc06fcaf0d3b6074d090fe0f
update gitignore
push time in 4 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 9436b525133906fb7fd5ba1fccd96e1377ffeab6
download the scatter intervals list and tweak haplotype_caller.nf
push time in 4 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha 950e742cb5411241f83e9f45f2b15f481699f3b7
update the gitignore
commit sha 775566a2105c8ddc7e675b1773812ca951672443
namespace tweaks for the parameters
commit sha 8118a5dc2bc55152eeaf02a3e52e7e4a313705dd
add a params_map
commit sha 168a7614218ca823a6d50b1c804eb809cb8e792c
port all modules to use a params map
commit sha 778acd74ec534d760ba4ccf400c144bf7b2950c7
Revert "port all modules to use a params map" This reverts commit 168a7614218ca823a6d50b1c804eb809cb8e792c.
commit sha a4bc8bb17c1c738f983bc98034f202aee077e4d9
interim commit
commit sha 9584bd4ecaf17e2fd1ea8257d1c31b63008dc9f5
compose the workflow
commit sha 523740e8c878927fba723158b1641da660b9f4d5
interim commit
commit sha 26f05992dd275c7a93afe04b1d72fa78a9bb07b3
interim commit
commit sha a3444d183dd60beb5e0e24db8060bbf0d51ee34b
test the haplotypecaller step
push time in 4 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha a3444d183dd60beb5e0e24db8060bbf0d51ee34b
test the haplotypecaller step
push time in 4 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 26f05992dd275c7a93afe04b1d72fa78a9bb07b3
interim commit
push time in 4 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 523740e8c878927fba723158b1641da660b9f4d5
interim commit
push time in 4 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha a4bc8bb17c1c738f983bc98034f202aee077e4d9
interim commit
commit sha 9584bd4ecaf17e2fd1ea8257d1c31b63008dc9f5
compose the workflow
push time in 4 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 778acd74ec534d760ba4ccf400c144bf7b2950c7
Revert "port all modules to use a params map" This reverts commit 168a7614218ca823a6d50b1c804eb809cb8e792c.
push time in 4 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 168a7614218ca823a6d50b1c804eb809cb8e792c
port all modules to use a params map
push time in 4 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 8118a5dc2bc55152eeaf02a3e52e7e4a313705dd
add a params_map
push time in 4 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 775566a2105c8ddc7e675b1773812ca951672443
namespace tweaks for the parameters
push time in 4 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 950e742cb5411241f83e9f45f2b15f481699f3b7
update the gitignore
push time in 4 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha b30efc045d1ea41757667634d7a0de46eed99309
add the script to download test data
commit sha 76ebf94a635a647bd470d5ca8dc09440a7aac6d2
interim commit
commit sha 2cf69126205a18f6799bafc0908bb3d17455b931
add the test_data folders via gitkeep
commit sha 2ed0b975c15355ce306b78e368987f53fe7e5c1e
interim commit
commit sha 970ee3320f3efeb73892f77bebd1d0add62b6389
iterim commit
commit sha 35a29553f29d1f002538430ec6b240a20e782787
tweak the path
commit sha ad82b141c123b360416bd9cdd7512ba043a4a088
interim commit
commit sha e6a672faa40d1ed950cf5fa36a6bb61f60a22a56
haplotype_caller is working now
commit sha c713dda5f5e7b63b7b1a9050742041f51f1b4975
should be working; but isn't
commit sha 5e11924f63d36c9dd6f3f9c718462730151a4341
checkpoint: used buffer to reshape the emitted value
commit sha f582bee8f1fba09632c5efbdf42d4b7ad269ae94
update the intervals file
commit sha a4bac73d7581942ed660827381cb4baaaf34f17f
interim commit
commit sha cef14ed206cc881adc7c9772dc5553b50be30fc2
interim commit
push time in 4 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha cef14ed206cc881adc7c9772dc5553b50be30fc2
interim commit
push time in 5 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha f582bee8f1fba09632c5efbdf42d4b7ad269ae94
update the intervals file
commit sha a4bac73d7581942ed660827381cb4baaaf34f17f
interim commit
push time in 5 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 5e11924f63d36c9dd6f3f9c718462730151a4341
checkpoint: used buffer to reshape the emitted value
push time in 5 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha c713dda5f5e7b63b7b1a9050742041f51f1b4975
should be working; but isn't
push time in 5 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha e6a672faa40d1ed950cf5fa36a6bb61f60a22a56
haplotype_caller is working now
push time in 5 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha ad82b141c123b360416bd9cdd7512ba043a4a088
interim commit
push time in 5 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 35a29553f29d1f002538430ec6b240a20e782787
tweak the path
push time in 5 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 970ee3320f3efeb73892f77bebd1d0add62b6389
iterim commit
push time in 5 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 2ed0b975c15355ce306b78e368987f53fe7e5c1e
interim commit
push time in 5 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 2cf69126205a18f6799bafc0908bb3d17455b931
add the test_data folders via gitkeep
push time in 5 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha 76ebf94a635a647bd470d5ca8dc09440a7aac6d2
interim commit
push time in 5 days
push eventabhi18av/gatk4-germline-snps-indels
commit sha b30efc045d1ea41757667634d7a0de46eed99309
add the script to download test data
push time in 5 days
PR opened abhi18av/gatk4-germline-snps-indels
pr created time in 5 days
PR closed seqeralabs/gatk4-germline-snps-indels
This is a stand-in for the official PR
https://github.com/seqeralabs/gatk4-germline-snps-indels/pull/4
pr closed time in 5 days
PR opened seqeralabs/gatk4-germline-snps-indels
This is a stand-in for the official PR
https://github.com/seqeralabs/gatk4-germline-snps-indels/pull/4
pr created time in 5 days
fork abhi18av/gatk4-germline-snps-indels
Workflow for germline short variant discovery using GATK4
fork in 5 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha 0b04a51073ceac1ad72c9ec877bd4a08ff6fc61e
temp commit
push time in 5 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha fa3b6a88e9532c7dec8399acada06d07a92f88ab
cram_to_bam is working with DSL2
push time in 5 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha f76f77f83c230fab9c693528ba6515f9b1c633f9
temp commit
push time in 5 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha f7aeab42622da1e7f2031ab1cd95fc570300a677
temp commit
push time in 5 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha 32f12c605034f216245db062a4eddb7bfc9cf99c
temp commit
push time in 5 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha ebcae4c3cf9e5ce3f60e9ac281e90c764b198e9f
temp commit during server based iterations
push time in 5 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha 8ae3582fed4cbc2c7e93d50892372d8b7ca5ccd8
iterate at a module level
push time in 5 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha 8b715e26dcd68e893916bba9c3182d190326bd25
update the module level .gitignore
push time in 5 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha 4711ac9bd40d1d58f7c4dea35578fadfef8c8e92
add a test workflow
push time in 5 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha 0b6c3118e8ad916483212722175a29097220f854
finalize merge_gvcfs.nf
commit sha acf50a423d67451df477075ae61ff89490e6bc90
start testing on the server
push time in 5 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha 58eabe1b6a27d7ac6f88bbc0034c20b5ea719468
remove non-POC code
push time in 6 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha 2567a72a29490c2407a1ca10815c7c64d15c5dbb
cleanup the repo from other modules
push time in 6 days
PR opened seqeralabs/gatk4-germline-snps-indels
pr created time in 6 days
create barnchseqeralabs/gatk4-germline-snps-indels
branch : feat/port-haplotypecaller-workflow
created branch time in 6 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha a7249a9078cde68771e404109fba22a99793db84
reaching the completion of draft for the first workflow
push time in 6 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha 6e36d606e7fdbc8239b4fd4a8076017eeeb3705f
reaching the completion of draft for the first workflow
push time in 6 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha 91f5fd10a06723b27a4d839f793d56d26903142b
Focusing on completing the haplotype_caller workflow first
push time in 6 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha 5dc859af1dcf5e0e6da02b3793163a23bab8ea17
add stubs for the workflow and check runtime errors
push time in 6 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha 14ceb38a498cdade14a779ebde6c1021cd8757b4
ported split_interval_list
push time in 6 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha a146e5b279026b1eab9f2824da723da388eb4f34
ported the check_samples_unique
push time in 6 days
PR opened seqeralabs/gatk4-germline-snps-indels
pr created time in 7 days
create barnchseqeralabs/gatk4-germline-snps-indels
created branch time in 7 days
delete branch seqeralabs/gatk4-germline-snps-indels
delete branch : feat/gatk4-pipeline
delete time in 7 days
PR opened seqeralabs/gatk4-germline-snps-indels
The WDL reference for this pipeline is here https://github.com/gatk-workflows/gatk4-germline-snps-indels
pr created time in 7 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha 0b52eccd7c51bda5a1395bb58e4cfc7868ecbced
add a basic gitignore file
commit sha a7a652ebfb9cdeff1ad8da97df147a734cfee26d
add stubs for the workflow and modules
commit sha 6e71cd726306706621c3522cc039f9f9df1b3962
add wdl tasks for the haplotypecaller
commit sha 74f45e319669f7266235acca21637834752463f8
add stubs for all nextflow modules for the pipeline
commit sha 905d17d882de346a144a7667e9226ca6ed4bf9ac
Merge pull request #1 from seqeralabs/feat/gatk4-pipeline add folder structure and module stubs
push time in 7 days
PR merged seqeralabs/gatk4-germline-snps-indels
The WDL reference for this pipeilne is here https://github.com/gatk-workflows/gatk4-germline-snps-indels
pr closed time in 7 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha 6e71cd726306706621c3522cc039f9f9df1b3962
add wdl tasks for the haplotypecaller
commit sha 74f45e319669f7266235acca21637834752463f8
add stubs for all nextflow modules for the pipeline
push time in 7 days
push eventabhi18av/gatk4-germline-snps-indels-docker
commit sha 423e25389ccbeb8b71a6d77140a6b39f53f93dd9
trigger build
push time in 7 days
push eventabhi18av/gatk4-germline-snps-indels-docker
commit sha bff46c761edd208a724a05badfef583dfaefae8e
add the conda.yml file
push time in 7 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha a7a652ebfb9cdeff1ad8da97df147a734cfee26d
add stubs for the workflow and modules
push time in 7 days
PR opened seqeralabs/gatk4-germline-snps-indels
pr created time in 7 days
push eventseqeralabs/gatk4-germline-snps-indels
commit sha 0b52eccd7c51bda5a1395bb58e4cfc7868ecbced
add a basic gitignore file
push time in 7 days
create barnchseqeralabs/gatk4-germline-snps-indels
created branch time in 7 days
issue openedpulumi/pulumi-azure-nextgen
Hi Team,
Thanks for the wonderful product!
I was wondering whether the azure-nextgen is stable enough to add support for the F# template.
As of today, I think the only C# is available.
$ pulumi new azure-nextgen-fsharp
error: template 'azure-nextgen-fsharp' not found
Did you mean this?
azure-nextgen-csharp
created time in 9 days
push eventabhi18av/CertificationsAndCourses
commit sha 832ce3e3d2dc99f2a0ce0649dde396c13911b5e9
add the cambridge hackathon certificate
push time in 10 days
PR closed nextflow-io/nextflow
This PR adds the Command Line Interface section in the docs.
- CLI top-level options

- CLI top-level commands

pr closed time in 10 days
pull request commentnextflow-io/nextflow
feat: add the docs for CLI interface
I'm closing this PR since there's another PR which builds upon this work.
https://github.com/nextflow-io/nextflow/pull/1759
comment created time in 10 days
pull request commentnextflow-io/nextflow
This PR builds upon the PR here https://github.com/nextflow-io/nextflow/pull/1751
comment created time in 10 days
startedjbangdev/jbang
started time in 11 days