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If you are wondering where the data of this site comes from, please visit https://api.github.com/users/ethanwhite/events. GitMemory does not store any data, but only uses NGINX to cache data for a period of time. The idea behind GitMemory is simply to give users a better reading experience.
Ethan White (he/him) ethanwhite @weecology, Univ of Florida Gainesville, FL http://ethanwhite.org Professor at University of Florida. Moore Investigator in Data-Driven Discovery. I work on ecology, data, open science, & open source.

bendmorris/neon_portal 3

Django web app for data entry into the dodobase system.

embaldridge/commonness-and-rarity 2

This repository contains some ideas for several projects exploring the commonness and rarity of species.

ahhurlbert/brubertlab 0

sandbox for learning github for the Brubert lab

aroopsind/data_carpentry 0

UF Course Fall 2015; data computation in r; Professor Ethan White

issue openedweecology/retriever

Add Forest Health Monitoring historical dataset

From 1991 to 1999 the USDA collected information of individual tree crown and health for trees in the FIA. The data is stored in .csv files, but there are some challenges for cleaning and harmonizing it.

A description of the dataset can be found here: https://www.fs.fed.us/foresthealth/protecting-forest/forest-health-monitoring/ Data can be found here: https://www.fia.fs.fed.us/tools-data/other_data/index.php

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created tagweecology/PortalData

tagv2.82.0

Official Repo of the Portal Project Data

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Update data and trigger archive: GitHub Build 133 [skip ci] [cron]

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issue commentweecology/retriever

Add fire and management history data

  • [ ] Activity Range Vegetation Improvement: https://data.fs.usda.gov/geodata/edw/edw_resources/shp/S_USA.Activity_RngVegImprove.zip
  • [ ] Activity Silviculture Timber Stand Improvement: https://data.fs.usda.gov/geodata/edw/edw_resources/shp/S_USA.Activity_SilvTSI.zip
  • [ ] SilvicultureReforestation: https://data.fs.usda.gov/geodata/edw/edw_resources/shp/S_USA.Activity_SilvReforestation.zip
  • [ ] Timber Harvests: https://data.fs.usda.gov/geodata/edw/edw_resources/shp/S_USA.Activity_TimberHarvest.zip
  • [ ] FIRESTAT Fire Occurrence - Yearly Update: https://data.fs.usda.gov/geodata/edw/edw_resources/shp/S_USA.Fire_Occurrence_FIRESTAT_YRLY.zip
  • [ ] MTBS Fire Occurrence Points: https://data.fs.usda.gov/geodata/edw/edw_resources/shp/S_USA.MTBS_FIRE_OCCURRENCE_PT.zip
  • [ ] MTBS Burn Area Boundary: https://data.fs.usda.gov/geodata/edw/edw_resources/shp/S_USA.MTBS_BURN_AREA_BOUNDARY.zip
  • [ ] National USFS Final Fire Perimeter: https://data.fs.usda.gov/geodata/edw/edw_resources/shp/S_USA.FinalFirePerimeter.zip
  • [ ] Spatial Wildfire Occurrence Data for the United States, 1992-2015 (FPA FOD 4th Edition): https://data.fs.usda.gov/geodata/edw/edw_resources/fc/S_USA.FPA_FOD_4thedition.gdb.zip
MarconiS

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issue openedweecology/retriever

Global river density, seasonal and surface water occurrence and upstream area

From the same source of soil data (www.OpenLandMap.org) there is a dataset of global density of rivers and upstream area that can be used to infer the effect of hydrology on forest dynamics and diversity at scale.

Here is the link to the derived dataset: Global river density, seasonal and surface water occurrence and upstream area: https://zenodo.org/record/3355007

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issue commentweecology/retriever

Add Soil data macrosys

Here is the link to the Zenodo archive for all derived datasets of global soil properties (0.065km2 spatial resolution)

  • [ ] Soil bulk density: https://zenodo.org/record/2525665
  • [ ] Soil pH in H2O: https://zenodo.org/record/2525664
  • [ ] Soil texture classes (USDA system): https://zenodo.org/record/2525817
  • [ ] Coarse fragments %: https://zenodo.org/record/2525682
  • [ ] Silt content in % (kg / kg): https://zenodo.org/record/2525676
  • [ ] Clay content in % (kg / kg): https://zenodo.org/record/2525663
  • [ ] Sand content in % (kg / kg): https://zenodo.org/record/2525662
  • [ ] Predicted USDA soil suborders : https://zenodo.org/record/2657408
  • [ ] Predicted USDA soil orders: https://zenodo.org/record/2658183
  • [ ] Soil organic carbon stock in kg/m2: https://zenodo.org/record/2536040
  • [ ] Predicted USDA soil orders : https://zenodo.org/record/2658183
  • [ ] Soil organic carbon content in x 5 g / kg at 6 standard depths: https://zenodo.org/record/2525553
  • [ ] Soil water content (volumetric %): https://zenodo.org/record/2784001
  • [ ] Soil available water capacity in mm derived for 5 standard layers : https://zenodo.org/record/2629149
henrykironde

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issue commentweecology/retriever

Add Soil water content data - macrosys

@MarconiS https://gitlab.com/openlandmap/global-layers

henrykironde

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issue openedweecology/retriever

Add fire and management history data

There are many geospatial layers collected and managed by Forest Service programs available in a map service here: https://data.fs.usda.gov/geodata/edw/datasets.php

These data are shapefiles and contain many different kind of information. The most useful for ongoing projects, right now, are those containing fire occurrence, prescribed fire management, and generally silviculture and forest cut managements.

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Ben Weinstein

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Fewer runners, add rspm for pkgdown and codecov (#262)

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tagv0.1.7

Pytorch implementation of the deepforest model for tree crown RGB detection.

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add corresponding hsi and chm data from new 2019 plots

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add missing 2018 plots

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2018 hyperspec

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delete branch weecology/PortalData

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Add hooks readme, closes #298 [no version bump] (#400)

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issue closedweecology/PortalData

Check tags in commit messages

I think git hooks can be used to add instructions to the default commit message, and also to check that a tag is included in a commit message. Might not be a big deal for folks who are already regularly updating PortalData, but a useful feature to include in livedat?

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ha0ye