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If you are wondering where the data of this site comes from, please visit https://api.github.com/users/mhsieh/events. GitMemory does not store any data, but only uses NGINX to cache data for a period of time. The idea behind GitMemory is simply to give users a better reading experience.
Mengjuei Hsieh mhsieh Pacific Biosciences East Menlo Park, California, USA http://pacbiodevnet.com I fix your problem with a bash script.

PacificBiosciences/IsoSeq_SA3nUP 70

Documentation and Developers Code Base for Iso-Seq SMRTAnalysis 3.x and beyond

PacificBiosciences/pitchfork 14

Prototyping pacbio build from github source

PacificBiosciences/smrtflow 10

SMRT Link and Analysis Server, PacBio Scala analysis tools and Common models

mhsieh/SMRTAnalysis_2.3.0_install 1

demonstrating a smrtportal install

mhsieh/h5r-windows 0

An environment for building h5r dependencies on windows

mhsieh/htslib 0

deprecated pacbio htslib

mhsieh/mingw-w64-htslib 0

Continuous integration for htslib build on mingw-w64

mhsieh/pyBigWig 0

A python extension for quick access to bigWig and bigBed files

mhsieh/SMRT-Link 0

THIS REPO HAS BEEN DEPRECATED AND WILL BE REMOVED BEFORE 2018. PLEASE EMAIL SUPPORT@PACB.COM IF YOU NEED ASSISTANCE. SMRT® Link is the web-based end-to-end workflow manager for the Sequel™ System.

mhsieh/SQANTI2 0

Private repo for Liz's modified SQANTI

issue closedPacificBiosciences/BindingCalculator

Release Notification

This issue is solely to trigger email notification when a new release is published. I'll leave a comment here when new versions are available.

The Binding Calculator version 2.1.0.2 is now available. This version contains one change:

  • Show DTT contribution in titration with diffusion loading (issue 24193)

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pb-devans

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Herb Maeder

commit sha 3d3204b958071e3351e7d25fa85197e75f9d6de8

Initial branch, develop to release/prep, preend-of-sprint 2020.19 09/21/2020 @ smrtlink-incremental_10.0.0.SNAPSHOT106704 (RBS-DEVSMRTLINKINC-33831) @ sequel-icc_10.0.0.SNAPSHOT106675 (IRP-SR-1779) @ sequel-pac_10.0.0.SNAPSHOT106673 (IRP-SPR-1746)

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Herb Maeder

commit sha 59892322c2e3fb73130ad6c2999d257cfcb311a1

Otter Release branch, develop to release/prep, end-of-sprint 2020.19 09/23/2020 @ smrtlink-incremental_10.0.0.SNAPSHOT106868 (RBS-DEVSMRTLINKINC-33890) @ sequel-icc_10.0.0.SNAPSHOT106869 (IRP-SR-1790) @ sequel-pac_10.0.0.SNAPSHOT106872 (IRP-SPR-1760)

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Herb Maeder

commit sha 549fd25361cea52ac42d87e616f2d84876b03708

Merge HEAD of release/prep to develop, end-of-sprint 2020.19 (09/23/2020)

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Armin Töpfer

commit sha 95db1a704901a65df5cba69ba41c33b77551c3e9

Bump version to 1.5.0

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Armin Töpfer

commit sha 15dc90a241246614c3592c08ec53112f820d9da4

Switch to gap compressed identity filter

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Armin Töpfer

commit sha 9ca65716fc72abe056f0e5e63e11d3312cdb7fb1

Gap-compressed with hyphen

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Armin Toepfer

commit sha 28f613d0956cc459cca2528a97b49b4f87de588e

Merge pull request #145 in SAT/pbmm2 from feature/TAG-4469-default-identity-filter-in-pbmm2-to-min-gap-comp-id-perc to develop * commit '9ca65716fc72abe056f0e5e63e11d3312cdb7fb1': Gap-compressed with hyphen Switch to gap compressed identity filter Bump version to 1.5.0

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Armin Töpfer

commit sha e4df3865b550354cc05d0bd0a25eaf48b623912c

Fix README numbering, no impact on rendering

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Armin Töpfer

commit sha b61077d8a8aafdc9849555d3b55538dfd740f77f

Hide --min-concordance-perc and --min-id-perc

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Armin Toepfer

commit sha 5859465b43b0164158392d629b12c2cb480dfe15

Merge pull request #146 in SAT/pbmm2 from feature/TAG-4470-deprecate-current-concordance-calculation-in-pbmm2 to develop * commit 'b61077d8a8aafdc9849555d3b55538dfd740f77f': Hide --min-concordance-perc and --min-id-perc Fix README numbering, no impact on rendering

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Derek Barnett

commit sha 90815a78e543ca16125b5a06c8ab58fd249a7b74

Use cigar counts calculator from pbcopper

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Derek Barnett

commit sha 0c8098d265d2a91b9dc244b343d88356d210a72f

Merge pull request #147 in SAT/pbmm2 from feature/TAK-1060-use-pbcopper-identity to develop * commit '90815a78e543ca16125b5a06c8ab58fd249a7b74': Use cigar counts calculator from pbcopper

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Derek Barnett

commit sha b49cf53dcf71f494b7c2c916e7c016c5ba0c0578

Added missing ‘#include <unordered_map>’ (had relied on transitive inclusion from pbbam)

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Derek Barnett

commit sha c0b46d394d07ce346e941035b3491194b54bcbce

Merge pull request #148 in SAT/pbmm2 from bugfix/TAK-1087-transitive-include to develop * commit 'b49cf53dcf71f494b7c2c916e7c016c5ba0c0578': Added missing ‘#include <unordered_map>’ (had relied on transitive inclusion from pbbam)

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David Seifert

commit sha f031c57aecc2334fba1fdbf45c01d92c94a63d44

Update gtest wrapdb to 1.10.0

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David Seifert

commit sha d9b3f70bd2dca0d9f3c43314eaa6ce9d1954b0f4

Update zlib wrapdb to rev 5

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David Seifert

commit sha 0572cba208f3b42626fdb3f435a11240036d048e

Update htslib wrapdb to 1.10.2

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David Seifert

commit sha e1718d228f1586781412c72c3192c672c971697d

Merge pull request #149 in SAT/pbmm2 from feature/TAK-1156-update-wrapdb to develop * commit '0572cba208f3b42626fdb3f435a11240036d048e': Update htslib wrapdb to 1.10.2 Update zlib wrapdb to rev 5 Update gtest wrapdb to 1.10.0

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Derek Barnett

commit sha d4d072289bb05de5ace171de0335392d5a71688f

Add logged warning for spaces in sample names. This can lead to downstream failures in some contexts. In that case, the error message only mentions not being able to match read groups, with no extra information provided. With this change, we will at least have that reason availlable in the error logs. See https://smrtlink-sms.nanofluidics.com:8243/sl/analysis/results/32588?show=status

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Derek Barnett

commit sha f31646f05d267ff5e6b47f98f8a0a849214de62d

Merge pull request #150 in SAT/pbmm2 from feature/TAK-1181-warn-on-sample-name-space to develop * commit 'd4d072289bb05de5ace171de0335392d5a71688f': Add logged warning for spaces in sample names.

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