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If you are wondering where the data of this site comes from, please visit https://api.github.com/users/iobis/events. GitMemory does not store any data, but only uses NGINX to cache data for a period of time. The idea behind GitMemory is simply to give users a better reading experience.
OBIS iobis Belgium http://www.obis.org Ocean Biodiversity Information System

iobis/ebsa 2

R code to calculate biodiversity indices and other metrics in support of the CBD EBSA process

iobis/env-data 2

ENV-DATA related issues and documentation

iobis/dataproducts 1

Dataproducts using OBIS data

iobis/dataqueue 1

On deck datasets on their way into an OBIS node

iobis/dataset-edna 1

eDNA dataset demonstrator

iobis/demo-polar 1

Demo of intersecting OBIS records and arctic or antarctic geometries.

iobis/dwca-processor 1

Parses and denormalizes Darwin Core Archives

iobis/ebsa_np 1

EBSA statistics using R

iobis/benchmarking 0

Server IOPS benchmarking

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Pieter Provoost

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fixed migrations

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Pieter Provoost

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Alessio Fabiani

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[Backport to 3.2.x][Fixes #7895] File upload fails with 400 Bad Request (#7898) * [Fixes #7895] File upload fails with 400 Bad Request (cherry picked from commit 84a1228b72049e967eb333e8b6907b9621e7131e) * [Fixes #7895] File upload fails with 400 Bad Request

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Alessio Fabiani

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[Fixes #7739] An empty map cannot be saved (#7806) (#7917) (cherry picked from commit 246d7b6bc47324b04f04276a1cd5cdb1bbdbe56f) # Conflicts: # geonode/thumbs/thumbnails.py (cherry picked from commit d3e38b49a7c80bb60fd57590a589f848a89abca8) Co-authored-by: NAGGINDA MARTHA <marthamareal@gmail.com>

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afabiani

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[Performance] Update GeoFence security rules only if the DB transaction is successful (cherry picked from commit 5bf6bea218cc720c8da0e4df62a19d7f266761e3)

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NAGGINDA MARTHA

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[Fixes #7835] The first time a map is saved thumbnail is created using the default style instead of the selected one (#7846)

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afabiani

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[Performance] Update GeoFence security rules only if the DB transaction is successful (cherry picked from commit 5bf6bea218cc720c8da0e4df62a19d7f266761e3)

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[Backport 3.2.x][Fixes #7959] Unable to set permission using django admin (#7961) * [Fixes #7959] Unable to set permission using django admin * Fix variable assignment for non GroupProfile groups

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commit sha 28452fdcefe6ce784907accbb4b5b586734fbde9

[Fixes #7958] OSM refuses to return tiles while generating thumbnails (#7978) (#7986) Co-authored-by: Giovanni Allegri <giohappy@gmail.com> Co-authored-by: mattiagiupponi <51856725+mattiagiupponi@users.noreply.github.com> Co-authored-by: Giovanni Allegri <giohappy@gmail.com>

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commit sha 7cee4e8b1cfdbe0b132b283fd80cfca18bbf8660

[Backport to 3.3.x][Fixes #7957] RuntimeError not handled in sync_geonode_layers (#7993) (#7994) Co-authored-by: Alessio Fabiani <alessio.fabiani@geo-solutions.it>

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commit sha 311e7a88ab0bee8580e9ff4fc488931398cfe182

[Backport to 3.3.x][Fixes #7989] Misbehavior with upload resources re… (#7996) (#7997) * [Backport to 3.3.x][Fixes #7989] Misbehavior with upload resources requiring further user inputs * [Backport to 3.3.x][Fixes #7989] Misbehavior with upload resources requiring further user inputs * [Backport to 3.3.x][Fixes #7989] Misbehavior with upload resources requiring further user inputs Co-authored-by: Alessio Fabiani <alessio.fabiani@geo-solutions.it>

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Alessio Fabiani

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[Backport to 3.2.x][Fixes #7948] Error handling monitoring module (#7998) (#8001) (cherry picked from commit dea24e245b3dedc195a0b15913bbfd1268af9f58) # Conflicts: # pavement.py

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afabiani

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[Fixes #7948] Error handling monitoring module (#7995) (cherry picked from commit fa9a924b5a405726b33b75771ef4e7941a7dff95)

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[3.2.x][Fixes #7999] Set bulk permissions from resources list pages (#8000) * [Fixes #7999] Set bulk permissions from resources list pages * fix tests and form errors * fix form errors * - add submit loader * create a base perm update modal

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Jose Caceres

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[Fixes #8003] Update Spanish Translation (#8029) Update django.po and djangojs.po to include complete Spanish translation.

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Toni

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[Fixes #7927] Docker 3.3.x Geonode core theme is not changing (#8038) (cherry picked from commit 4b6dba26373aa857df36bb6172ba131414edea18)

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[Backport to 3.3.x][Fixes #6631] Remote Service does not use GetMap url as given in capabilities-document (#8040) (#8050) * [Backport to 3.3.x][Fixes #6631] Remote Service does not use GetMap url as given in capabilities-document * [Backport to 3.3.x][Fixes #6631] Remote Service does not use GetMap url as given in capabilities-document * [CircleCI] Fix test cases * [CircleCI] Fix test cases * [CircleCI] Fix test cases * [CircleCI] Fix test cases * [CircleCI] Fix test cases Co-authored-by: Alessio Fabiani <alessio.fabiani@geo-solutions.it>

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Alessio Fabiani

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[Backport to 3.2.x][Fixes #7895] File upload fails with 400 Bad Request (#7898) * [Fixes #7895] File upload fails with 400 Bad Request (cherry picked from commit 84a1228b72049e967eb333e8b6907b9621e7131e) * [Fixes #7895] File upload fails with 400 Bad Request

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Alessio Fabiani

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[Fixes #7739] An empty map cannot be saved (#7806) (#7917) (cherry picked from commit 246d7b6bc47324b04f04276a1cd5cdb1bbdbe56f) # Conflicts: # geonode/thumbs/thumbnails.py (cherry picked from commit d3e38b49a7c80bb60fd57590a589f848a89abca8) Co-authored-by: NAGGINDA MARTHA <marthamareal@gmail.com>

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afabiani

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[Performance] Update GeoFence security rules only if the DB transaction is successful (cherry picked from commit 5bf6bea218cc720c8da0e4df62a19d7f266761e3)

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[Fixes #7835] The first time a map is saved thumbnail is created using the default style instead of the selected one (#7846)

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afabiani

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afabiani

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[Performance] Update GeoFence security rules only if the DB transaction is successful (cherry picked from commit 5bf6bea218cc720c8da0e4df62a19d7f266761e3)

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[CircleCI] Fix test cases

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[CircleCI] Fix test cases

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[Backport 3.2.x][Fixes #7959] Unable to set permission using django admin (#7961) * [Fixes #7959] Unable to set permission using django admin * Fix variable assignment for non GroupProfile groups

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commit sha 28452fdcefe6ce784907accbb4b5b586734fbde9

[Fixes #7958] OSM refuses to return tiles while generating thumbnails (#7978) (#7986) Co-authored-by: Giovanni Allegri <giohappy@gmail.com> Co-authored-by: mattiagiupponi <51856725+mattiagiupponi@users.noreply.github.com> Co-authored-by: Giovanni Allegri <giohappy@gmail.com>

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[Fixes #7970] The form account/login is redirecting automatically to account/signup (#7980)

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commit sha 7cee4e8b1cfdbe0b132b283fd80cfca18bbf8660

[Backport to 3.3.x][Fixes #7957] RuntimeError not handled in sync_geonode_layers (#7993) (#7994) Co-authored-by: Alessio Fabiani <alessio.fabiani@geo-solutions.it>

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commit sha 311e7a88ab0bee8580e9ff4fc488931398cfe182

[Backport to 3.3.x][Fixes #7989] Misbehavior with upload resources re… (#7996) (#7997) * [Backport to 3.3.x][Fixes #7989] Misbehavior with upload resources requiring further user inputs * [Backport to 3.3.x][Fixes #7989] Misbehavior with upload resources requiring further user inputs * [Backport to 3.3.x][Fixes #7989] Misbehavior with upload resources requiring further user inputs Co-authored-by: Alessio Fabiani <alessio.fabiani@geo-solutions.it>

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Alessio Fabiani

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[Backport to 3.2.x][Fixes #7948] Error handling monitoring module (#7998) (#8001) (cherry picked from commit dea24e245b3dedc195a0b15913bbfd1268af9f58) # Conflicts: # pavement.py

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afabiani

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[Fixes #7948] Error handling monitoring module (#7995) (cherry picked from commit fa9a924b5a405726b33b75771ef4e7941a7dff95)

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[3.2.x][Fixes #7999] Set bulk permissions from resources list pages (#8000) * [Fixes #7999] Set bulk permissions from resources list pages * fix tests and form errors * fix form errors * - add submit loader * create a base perm update modal

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Jose Caceres

commit sha 7bff376846f4d3b68d002570c6cdf11620fae756

[Fixes #8003] Update Spanish Translation (#8029) Update django.po and djangojs.po to include complete Spanish translation.

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Toni

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[Fixes #7927] Docker 3.3.x Geonode core theme is not changing (#8038) (cherry picked from commit 4b6dba26373aa857df36bb6172ba131414edea18)

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[Backport to 3.3.x][Fixes #6631] Remote Service does not use GetMap url as given in capabilities-document (#8040) (#8050) * [Backport to 3.3.x][Fixes #6631] Remote Service does not use GetMap url as given in capabilities-document * [Backport to 3.3.x][Fixes #6631] Remote Service does not use GetMap url as given in capabilities-document * [CircleCI] Fix test cases * [CircleCI] Fix test cases * [CircleCI] Fix test cases * [CircleCI] Fix test cases * [CircleCI] Fix test cases Co-authored-by: Alessio Fabiani <alessio.fabiani@geo-solutions.it>

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Pieter Provoost

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save eovs

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issue openediobis/obistools

Citation extraction as csv not a doi

As we have discussed before, I think we should provide a doi per each data extraction from OBIS. At the moment we only provide the CSV citations including a long list of citations. When someone is working on big data with multiple dataset citations, this could be problematic to include all the citations in the main text, and they should go usually to the supplementary file, which might affect the visibility of the citations. It will be nice if we could provide dois per each date extraction.

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meliezer

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Updated URL

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Pieter Provoost

commit sha 563f238b4ef12f242dcd0a50ed8411217191f869

Merge pull request #5 from meliezer/patch-2 Updated URL

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meliezer

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issue closediobis/manual

Missing information: Which DwC terms would 'arrive' to the OBIS format?

Hi, The reader has no idea which DwC terms will remain as information once harvested by OBIS, and which will remain only when the suer downloads the original DwC-A file.

Thank you.

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meliezer

issue commentiobis/manual

Missing information: Which DwC terms would 'arrive' to the OBIS format?

Thank you @pieterprovoost

meliezer

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issue commentiobis/manual

Missing information: Which DwC terms would 'arrive' to the OBIS format?

@meliezer That information can be found on the data access page: https://obis.org/manual/access/. In summary we keep all fields but some are quality controlled and may be modified.

meliezer

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meliezer

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Adding Sex to measurementValueID section

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Pieter Provoost

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Merge pull request #4 from meliezer/patch-1 Adding Sex to measurementValueID section

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The OBIS manual

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issue openediobis/manual

Missing information: Which DwC terms would 'arrive' to the OBIS format?

Hi, The reader has no idea which DwC terms will remain as information once harvested by OBIS, and which will remain only when the suer downloads the original DwC-A file.

Thank you.

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issue commentiobis/obis-issues

Update extended measurement or fact extension to follow existing dwciri namespace

Does anyone know if this would work with IPT? As far as I know there's no indication of namespace in the mapping panel?

Yes. Have a look at the Audubon Media Description Extension (https://tools.gbif.org/dwca-validator/extension.do?id=http://rs.tdwg.org/ac/terms/Multimedia), which uses terms with the same label but different namespace. In the IPT both terms are presented for mapping.

albenson-usgs

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issue commentiobis/obis-issues

Update extended measurement or fact extension to follow existing dwciri namespace

It's maybe a nice theoretical approach, but it has been used like this for years now. Maybe we should come up with an easy mapping from the current system to the dwciri namespace, without harassing users.

albenson-usgs

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issue commentiobis/obis-issues

Update extended measurement or fact extension to follow existing dwciri namespace

Does anyone know if this would work with IPT? As far as I know there's no indication of namespace in the mapping panel?

albenson-usgs

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chore: autopublish 2021-09-15T15:06:54Z

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